STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A550CC55Thioredoxin-like protein. (139 aa)    
Predicted Functional Partners:
A0A550C648
Ribosomal protein S16 domain-containing protein.
   
 
 0.992
A0A550CAF8
Ribosomal protein S2, flavodoxin-like domain-containing protein; Belongs to the universal ribosomal protein uS2 family.
   
 
 0.992
A0A550CD23
Mitochondrial large subunit ribosomal protein-domain-containing protein.
   
 
 0.992
A0A550C3N8
39S mitochondrial ribosomal protein L46-domain-containing protein.
   
 
 0.991
A0A550CXW6
Ribosomal protein L34-domain-containing protein.
   
 
 0.990
A0A550C6L7
Ribosomal protein L10e/L16; Belongs to the universal ribosomal protein uL16 family.
   
  0.989
A0A550CNB0
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
 
 0.989
A0A550CKI8
Ribonuclease III domain-containing protein.
   
 
 0.988
A0A550CPC1
Ribosomal_S10 domain-containing protein.
   
 
 0.988
A0A550D072
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.988
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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