STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A550CC85Uncharacterized protein. (321 aa)    
Predicted Functional Partners:
A0A550CJV0
Uncharacterized protein.
   
 
 0.558
A0A550BTW0
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.525
A0A550CNC4
Elongation of fatty acids protein.
    
 0.525
A0A550CN13
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
  0.517
A0A550C1I0
Uncharacterized protein.
   
 
 0.515
A0A550CIW9
3-oxo-5-alpha-steroid 4-dehydrogenase-domain-containing protein.
    
  0.507
A0A550CUX1
Uncharacterized protein.
     
 0.504
A0A550C239
Diacylglycerol acyltransferase-domain-containing protein.
   
 
 0.490
A0A550CRU9
HAD-like domain-containing protein.
     
 0.487
A0A550C9E9
Pyridoxal phosphate-dependent transferase.
     
  0.485
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.