STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A550CC97Uncharacterized protein. (269 aa)    
Predicted Functional Partners:
A0A550CA77
DNA polymerase alpha/epsilon subunit B-domain-containing protein.
    
 0.639
A0A550CLU8
Small nuclear ribonucleoprotein Sm D2.
    
  0.614
A0A550CU80
Small nuclear ribonucleo protein SmF.
    
  0.604
A0A550CLN2
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
  0.601
A0A550CU14
Uncharacterized protein.
  
 
  0.600
A0A550BXA6
Uncharacterized protein.
    
  0.579
A0A550CDV7
Uncharacterized protein.
    
  0.579
A0A550D051
WD40-repeat-containing domain protein.
    
  0.569
A0A550C8T9
ERCC4 domain-containing protein.
    
 0.566
A0A550CPH5
Uncharacterized protein.
    
 0.566
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.