STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A550CCC3Uncharacterized protein. (131 aa)    
Predicted Functional Partners:
A0A550C648
Ribosomal protein S16 domain-containing protein.
   
 0.979
A0A550CU36
Uncharacterized protein.
   
 0.972
A0A550CGN8
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
   
 0.971
A0A550CAF8
Ribosomal protein S2, flavodoxin-like domain-containing protein; Belongs to the universal ribosomal protein uS2 family.
   
 0.969
A0A550CBJ9
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
 0.968
A0A550CS48
Uncharacterized protein.
   
 0.967
A0A550D072
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.
   
 0.965
A0A550CU49
Uncharacterized protein.
   
 0.963
A0A550C621
Mitochondrial ribosomal subunit protein-domain-containing protein.
   
  0.961
A0A550CPC1
Ribosomal_S10 domain-containing protein.
   
 0.959
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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