Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A550CD04Cyclin-like protein. (285 aa)    
Predicted Functional Partners:
A0A550CLQ7
Kinase-like domain-containing protein.
    
 
 0.941
A0A550CBY5
HCNGP-like protein-domain-containing protein.
    
   0.804
A0A550CKH8
Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.
      
 0.630
A0A550CZZ9
Uncharacterized protein.
   
   0.587
A0A550CLV9
Cyclin-like protein; Belongs to the cyclin family.
      
 0.586
A0A550C5U0
Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.
    
   0.572
A0A550C2E6
Uncharacterized protein.
     
  0.567
A0A550CRJ7
Kinase-like domain-containing protein.
      
 0.567
A0A550BY94
ClpP/crotonase-like domain-containing protein.
    
   0.493
A0A550CD25
SRP54-type protein.
 
      0.485
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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