STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A550CD51zf-Mss51 domain-containing protein. (450 aa)    
Predicted Functional Partners:
A0A550CM85
SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.
    
 
 0.830
A0A550CW78
Heat shock protein 70 family; Belongs to the heat shock protein 70 family.
    
   0.747
A0A550BSB8
Velvet factor-domain-containing protein.
   
 
 0.620
A0A550CST5
Coiled-coil_56 domain-containing protein.
   
 
 0.620
A0A550CTW2
Uncharacterized protein.
    
 
 0.470
A0A550C1M9
GrpE-domain-containing protein.
    
   0.468
A0A550D0E2
Cytochrome c oxidase subunit VA-domain-containing protein.
    
 
 0.440
A0A550CWR0
Uncharacterized protein.
   
  
 0.423
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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