Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A550CD64L-lysine 6-monooxygenase (NADPH-requiring)-domain-containing protein. (520 aa)    
Predicted Functional Partners:
A0A550C3L0
Putative acyltransferase.
  
 
 
 0.840
A0A550CSQ5
GATA-type domain-containing protein.
      
 0.699
A0A550CTB4
Carrier domain-containing protein.
      
 0.649
A0A550BWG8
GTP cyclohydrolase 1 type 2/Nif3.
    
   0.569
A0A550C8T0
GTP cyclohydrolase 1 type 2/Nif3.
    
   0.569
A0A550D085
Enolase.
      
 0.512
A0A550CE43
Uncharacterized protein.
      
 0.511
A0A550CZH5
Uncharacterized protein.
   
  0.509
A0A550CLJ7
BZIP domain-containing protein.
      
 0.488
A0A550C6I7
3-hydroxy-3-methylglutaryl coenzyme A reductase.
      
 0.482
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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