STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A550CD67Protein transport protein SFT2; Nonessential protein required for the fusion of transport vesicles derived from the endocytic pathway with the Golgi complex. Belongs to the SFT2 family. (154 aa)    
Predicted Functional Partners:
A0A550C2M6
Longin-like domain-containing protein; Belongs to the synaptobrevin family.
    
 
 0.867
A0A550CM95
t-SNARE.
    
 
 0.827
A0A550CZ40
t-SNARE.
    
   0.817
A0A550CFU0
GRIP domain-containing protein.
    
   0.816
A0A550C977
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
    
   0.812
A0A550CYB5
Uncharacterized protein.
    
 
 0.683
A0A550CYB8
Uncharacterized protein.
    
 
 0.683
A0A550CYD2
Vesicle transport protein.
    
 
 0.683
A0A550C3G1
Ras family-domain-containing protein.
    
 
 0.662
A0A550D065
Dor1-like family-domain-containing protein.
    
   0.656
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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