STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A550CD75Uncharacterized protein. (356 aa)    
Predicted Functional Partners:
A0A550CUW9
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.990
A0A550CMC0
U3 small nucleolar RNA-associated protein 11.
   
 0.988
A0A550CRM5
Utp14 protein-domain-containing protein.
   
 0.988
A0A550BXW4
NUC141 domain-containing protein.
   
 0.986
A0A550C6K4
WD40-repeat-containing domain protein.
   
 
 0.986
A0A550CC74
WD40-repeat-containing domain protein.
   
 0.983
A0A550CDD4
WD40-repeat-containing domain protein.
   
 
 0.983
A0A550CBX3
CBF/Mak21 family-domain-containing protein.
   
 0.982
A0A550C9F6
WD40-repeat-containing domain protein.
   
 0.978
A0A550CAS2
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
   
 0.977
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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