Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
A0A550CD79PDCD5-related protein. (119 aa)    
Predicted Functional Partners:
A0A550CAH4
Chaperonin Cpn60/TCP-1 family.
   
 
 0.930
A0A550CD01
T-complex protein 1 subunit delta.
   
 
 0.912
A0A550CHM9
Chaperonin Cpn60/TCP-1 family.
   
 
 0.909
A0A550C8J0
T-complex protein 1 subunit gamma.
   
 
 0.885
A0A550CM05
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
   
 
 0.879
A0A550C7F4
Ribosomal protein S19e.
  
    0.847
A0A550CV68
Chaperonin Cpn60/TCP-1 family.
   
 
 0.839
A0A550CLN2
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
    0.838
A0A550C1C5
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
  
    0.829
A0A550CP74
Prefoldin.
  
   0.826
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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