STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A550CD83Uncharacterized protein. (1958 aa)    
Predicted Functional Partners:
A0A550C548
Uncharacterized protein.
    
 
 0.949
A0A550CPE6
CBFD_NFYB_HMF domain-containing protein.
    
 
 0.936
A0A550CSS0
Transcription initiation factor IID, 18kD subunit-domain-containing protein.
    
 
 0.895
A0A550CU86
Histone-fold-containing protein.
    
 
 0.883
A0A550C4V3
Uncharacterized protein.
   
 
 0.881
A0A550C6Y9
TATA box binding protein associated factor-domain-containing protein.
    
 
 0.877
A0A550C3A2
Transcription initiation factor TFIID subunit A-domain-containing protein.
    
 
 0.867
A0A550C3U9
PHD-type domain-containing protein.
   
 
 0.867
A0A550CRZ5
RFX-type winged-helix domain-containing protein.
    
   0.863
A0A550C5S7
SNF2 family N-terminal domain-containing protein.
  
 
0.852
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.