STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A550CD87Uncharacterized protein. (551 aa)    
Predicted Functional Partners:
A0A550BRF2
Uncharacterized protein.
    
 0.811
A0A550CLP7
Uncharacterized protein.
    
 0.811
A0A550CUV3
Uncharacterized protein.
    
 0.688
A0A550C740
Uncharacterized protein.
    
 0.616
A0A550CPA3
Uncharacterized protein.
  
  0.592
A0A550CSY2
14-3-3 protein; Belongs to the 14-3-3 family.
    
 0.582
A0A550C548
Uncharacterized protein.
    
 0.554
A0A550BUM9
Chromo domain-containing protein.
    
 0.552
A0A550CGC8
SRF-type transcription factor (DNA-binding and dimerization domain)-domain-containing protein.
    
 0.550
A0A550CMM4
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
    
 0.548
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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