STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A550CD97Uncharacterized protein. (227 aa)    
Predicted Functional Partners:
A0A550CA77
DNA polymerase alpha/epsilon subunit B-domain-containing protein.
    
 0.500
A0A550CN13
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
  0.478
A0A550C4V3
Uncharacterized protein.
    
   0.477
A0A550CLN2
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
  0.476
A0A550CU80
Small nuclear ribonucleo protein SmF.
    
  0.476
A0A550CLU8
Small nuclear ribonucleoprotein Sm D2.
    
 0.469
A0A550C8T9
ERCC4 domain-containing protein.
    
 0.466
A0A550CPH5
Uncharacterized protein.
    
 0.466
A0A550CQF7
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.466
A0A550BY01
AAA domain-containing protein.
    
 0.464
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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