STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A550CDC7Uncharacterized protein. (597 aa)    
Predicted Functional Partners:
A0A550C9T0
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.904
A0A550CGR0
NUC071 domain-containing protein.
   
 0.892
A0A550CIQ8
SART-1 protein.
    
 0.845
A0A550CV19
MIF4G like-domain-containing protein.
   
   0.801
A0A550CTZ1
Nop domain-containing protein.
   
 0.767
A0A550BYD2
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
   
 0.739
A0A550CAT9
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
   
 0.739
A0A550CN32
PRP1 splicing factor, N-terminal-domain-containing protein.
    
 0.734
A0A550CBX7
Sec63 Brl domain-containing protein.
    
 0.727
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
    
 0.707
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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