STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A550CDC8MYND-type domain-containing protein. (585 aa)    
Predicted Functional Partners:
A0A550CCQ4
Ribosomal L27 protein-domain-containing protein.
   
 
 0.859
A0A550C648
Ribosomal protein S16 domain-containing protein.
  
 
 0.839
A0A550CNB0
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
 
 0.783
A0A550CN39
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.776
A0A550CCU0
Translation protein SH3-like domain-containing protein.
   
   0.770
A0A550CNH4
Ribosomal L32p protein family-domain-containing protein.
   
 
 0.764
A0A550CBV3
Uncharacterized protein.
  
 
 0.762
A0A550CUJ4
Ribosomal protein L7/L12 C-terminal domain-containing protein.
  
 
 0.752
A0A550CGN8
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
  
 
 0.746
A0A550CYR7
Ribosomal protein S12/S23; Belongs to the universal ribosomal protein uS12 family.
  
 
 0.746
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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