STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A550CDK73' exoribonuclease family, domain 1-domain-containing protein. (259 aa)    
Predicted Functional Partners:
A0A550CH11
Uncharacterized protein.
  
 0.999
A0A550CP69
Ribosomal protein S5 domain 2-type protein.
  
 0.999
A0A550C1Y0
Ribosomal protein S5 domain 2-type protein.
   
 0.998
A0A550C2H8
Ribosomal protein S5 domain 2-type protein.
   
0.998
A0A550CLS7
EXOSC1 domain-containing protein.
   
 0.998
A0A550CCI1
3' exoribonuclease family, domain 1-domain-containing protein.
   
 0.996
A0A550CM01
Sas10/Utp3/C1D family-domain-containing protein.
   
 0.996
A0A550CAP8
rRNA-processing arch domain-containing protein.
   
 0.995
A0A550C6S4
Uncharacterized protein.
   
 0.988
A0A550CHA4
Uncharacterized protein.
   
 0.988
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.