STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A550CDP7Uncharacterized protein. (163 aa)    
Predicted Functional Partners:
A0A550BZZ0
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
   
 0.801
A0A550CW11
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
   
 0.801
A0A550CBU2
WD_REPEATS_REGION domain-containing protein.
    
 
 0.657
A0A550C3V2
BRO1-like domain-containing protein.
    
 
 0.600
A0A550CQM7
BRO1-like domain-containing protein.
    
 
 0.600
A0A550CZ51
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
    0.487
A0A550CLW8
UEV domain-containing protein.
   
 
 0.477
A0A550CIP5
BRO1 domain-containing protein.
    
 
 0.424
A0A550C7E7
Uncharacterized protein.
   
    0.412
A0A550CBV6
Uncharacterized protein.
   
    0.412
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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