STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A550CE45RlpA-like double-psi beta-barrel-protein domain-containing protein-containing protein. (115 aa)    
Predicted Functional Partners:
A0A550CRK7
Ubiquitin-related domain-containing protein.
    
 0.968
A0A550CQF3
RING-type domain-containing protein.
    
 0.967
A0A550CK43
Uncharacterized protein.
    
 0.942
A0A550CXN9
Uncharacterized protein.
    
 0.942
A0A550BYZ5
Armadillo-type protein.
    
 0.873
A0A550CMR8
Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.855
A0A550C466
JAB1/Mov34/MPN/PAD-1 ubiquitin protease-domain-containing protein.
    
 0.804
A0A550C577
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
   
 0.798
A0A550CEA3
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
   
 0.798
A0A550CCU7
E2_bind domain-containing protein.
   
 0.776
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.