STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A550CF00Uncharacterized protein. (259 aa)    
Predicted Functional Partners:
A0A550C9U2
Carrier domain-containing protein.
    
 0.665
A0A550BTW0
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.642
A0A550CUH9
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
    
  0.602
A0A550CFH1
Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.600
A0A550CHM0
Carrier domain-containing protein.
    
 0.595
A0A550CWR7
Very-long-chain 3-oxoacyl-CoA reductase; Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3- ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.
    
0.590
A0A550CLH0
Pex12 amino terminal region-domain-containing protein.
     
 0.581
A0A550CEQ7
Alkaline-phosphatase-like protein.
   
 
 0.578
A0A550CXA8
Uncharacterized protein.
   
  0.545
A0A550CXG5
TPR_REGION domain-containing protein.
   
  0.545
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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