STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A550CF66Vps39_2 domain-containing protein. (688 aa)    
Predicted Functional Partners:
A0A550CWN5
Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.
   
 0.942
A0A550C9H7
E3 ubiquitin-protein ligase PEP5.
   
 0.936
A0A550CM34
Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.934
A0A550CNN8
Pep3/Vps18/deep orange family-domain-containing protein.
   
 0.933
A0A550CYG7
Vacuolar protein sorting-associated protein 41; Required for vacuolar assembly and vacuolar traffic. Belongs to the VPS41 family.
   
 0.933
A0A550CFJ7
CNH domain-containing protein.
 
   
  0.910
A0A550CHS2
CNH domain-containing protein.
    
 
 0.853
A0A550CYM8
Golgi CORVET complex core vacuolar protein 8-domain-containing protein.
   
 
 0.835
A0A550C2G6
P-loop containing nucleoside triphosphate hydrolase protein.
    
 
 0.670
A0A550CL29
Uncharacterized protein.
    
 
 0.666
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.