STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A550CF97Uncharacterized protein. (255 aa)    
Predicted Functional Partners:
A0A550CPF4
Tyrosine--tRNA ligase.
  
 0.949
A0A550CX63
tRNA synthetases class I-domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.846
A0A550C5I8
Uncharacterized protein.
  
 0.844
A0A550C6G2
AA_TRNA_LIGASE_II domain-containing protein.
  
 0.824
A0A550CTJ3
tRNA synthetases class I, catalytic domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.806
A0A550CXC5
tRNA synthetases class I, catalytic domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.803
A0A550CZM1
Lysine--tRNA ligase.
   
 0.748
A0A550CNT8
Uncharacterized protein.
   
 0.689
A0A550CQA0
DALR_1 domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.674
A0A550CW68
AA_TRNA_LIGASE_II domain-containing protein.
  
 0.643
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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