STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A550CFP5PIN domain-like protein. (636 aa)    
Predicted Functional Partners:
A0A550CQF7
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.929
A0A550CKD3
DNA polymerase.
   
 0.880
A0A550CKG7
Ribonuclease H-like domain-containing protein.
   
 0.880
A0A550BVG8
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.859
A0A550BZK2
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.859
A0A550C5G7
Helicase ATP-binding domain-containing protein.
   
 0.859
A0A550C717
Ribonuclease H-like domain-containing protein.
   
 0.859
A0A550CA77
DNA polymerase alpha/epsilon subunit B-domain-containing protein.
   
 0.859
A0A550CQG4
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
 0.852
A0A550CHX5
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.839
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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