STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A550CFS3Uncharacterized protein. (466 aa)    
Predicted Functional Partners:
A0A550C951
Ubiquitin carboxyl-terminal hydrolase.
   
 
 0.984
A0A550CIM1
LsmAD domain-containing protein.
   
 
 0.913
A0A550CY90
Guanine nucleotide binding protein beta subunit.
   
 
 0.912
A0A550CTH9
Uncharacterized protein.
   
 
 0.909
A0A550CFS0
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
   
 
 0.903
A0A550CY39
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.881
A0A550CCH1
Armadillo-type protein.
   
 
 0.877
A0A550CXN7
Ribosomal protein S5, N-terminal domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.875
A0A550CRR9
Uncharacterized protein.
    
 
 0.867
A0A550CAN3
Nuclear cap-binding protein subunit 2.
   
 
 0.865
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
Server load: low (22%) [HD]