STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A550CFZ2Uncharacterized protein. (1177 aa)    
Predicted Functional Partners:
A0A550CLY9
GFO_IDH_MocA domain-containing protein.
     
 0.876
A0A550C6J0
SLD3 domain-containing protein.
    
 0.815
A0A550CCQ0
Uncharacterized protein.
    
 0.815
A0A550BRF2
Uncharacterized protein.
    
 
 0.813
A0A550CLP7
Uncharacterized protein.
    
 
 0.813
A0A550CGB6
Calponin homology domain-containing protein.
   
 
 0.788
A0A550CM77
Uncharacterized protein.
   
 0.772
A0A550CXV4
Uncharacterized protein.
   
 
 0.747
A0A550BTK3
Small GTPase-binding protein.
    
 0.735
A0A550C503
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.735
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.