STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THBS1Thrombospondin-1. (1144 aa)    
Predicted Functional Partners:
CD47
Leukocyte surface antigen CD47 isoform X1.
     
 0.998
MMP9
Matrix metalloproteinase-9.
    
 0.969
SDC1
Syndecan 1.
    
 0.964
ITGB3
Integrin beta; Belongs to the integrin beta chain family.
    
 0.960
ITGAV
Integrin alpha-V isoform X1; Belongs to the integrin alpha chain family.
   
 0.959
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.957
MMP2
72 kDa type IV collagenase.
   
 0.954
ITGA3
Integrin subunit alpha 3.
    
 0.953
LTBP1
Latent-transforming growth factor beta-binding protein 1 isoform X1.
     
 0.946
LOC101325973
Platelet glycoprotein 4-like isoform X1; Belongs to the CD36 family.
   
 0.937
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.