XPA protein (Tursiops truncatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

XPA

DNA repair protein complementing XP-A cells. (273 aa)

Predicted Functional Partners:

ERCC6

0.992

ERCC1

0.990

ERCC4

0.990

ERCC5

0.982

ERCC2

0.980

FANCM

0.976

DDB2

0.974

ERCC3

0.971

BIVM

0.967

EP300

0.964

Your Current Organism:

Tursiops truncatus

NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BIVM	DDB2	ENSTTRP00000005950	ENSTTRP00000013414	Basic immunoglobulin-like variable motif-containing protein isoform X3.	DNA damage-binding protein 2 isoform X3.	0.673
BIVM	EP300	ENSTTRP00000005950	ENSTTRP00000003136	Basic immunoglobulin-like variable motif-containing protein isoform X3.	Histone acetyltransferase p300.	0.980
BIVM	ERCC1	ENSTTRP00000005950	ENSTTRP00000007874	Basic immunoglobulin-like variable motif-containing protein isoform X3.	ERCC excision repair 1, endonuclease non-catalytic subunit.	0.822
BIVM	ERCC2	ENSTTRP00000005950	ENSTTRP00000007861	Basic immunoglobulin-like variable motif-containing protein isoform X3.	TFIIH basal transcription factor complex helicase XPD subunit.	0.961
BIVM	ERCC3	ENSTTRP00000005950	ENSTTRP00000016193	Basic immunoglobulin-like variable motif-containing protein isoform X3.	TFIIH basal transcription factor complex helicase XPB subunit isoform X1.	0.946
BIVM	ERCC4	ENSTTRP00000005950	ENSTTRP00000008876	Basic immunoglobulin-like variable motif-containing protein isoform X3.	DNA repair endonuclease XPF.	0.868
BIVM	ERCC5	ENSTTRP00000005950	ENSTTRP00000005952	Basic immunoglobulin-like variable motif-containing protein isoform X3.	DNA repair protein complementing XP-G cells isoform X1.	0.889
BIVM	ERCC6	ENSTTRP00000005950	ENSTTRP00000013957	Basic immunoglobulin-like variable motif-containing protein isoform X3.	DNA excision repair protein ERCC-6 isoform X2.	0.989
BIVM	FANCM	ENSTTRP00000005950	ENSTTRP00000006317	Basic immunoglobulin-like variable motif-containing protein isoform X3.	Fanconi anemia group M protein isoform X1.	0.871
BIVM	XPA	ENSTTRP00000005950	ENSTTRP00000000477	Basic immunoglobulin-like variable motif-containing protein isoform X3.	DNA repair protein complementing XP-A cells.	0.967
DDB2	BIVM	ENSTTRP00000013414	ENSTTRP00000005950	DNA damage-binding protein 2 isoform X3.	Basic immunoglobulin-like variable motif-containing protein isoform X3.	0.673
DDB2	ERCC1	ENSTTRP00000013414	ENSTTRP00000007874	DNA damage-binding protein 2 isoform X3.	ERCC excision repair 1, endonuclease non-catalytic subunit.	0.844
DDB2	ERCC2	ENSTTRP00000013414	ENSTTRP00000007861	DNA damage-binding protein 2 isoform X3.	TFIIH basal transcription factor complex helicase XPD subunit.	0.852
DDB2	ERCC3	ENSTTRP00000013414	ENSTTRP00000016193	DNA damage-binding protein 2 isoform X3.	TFIIH basal transcription factor complex helicase XPB subunit isoform X1.	0.881
DDB2	ERCC4	ENSTTRP00000013414	ENSTTRP00000008876	DNA damage-binding protein 2 isoform X3.	DNA repair endonuclease XPF.	0.892
DDB2	ERCC5	ENSTTRP00000013414	ENSTTRP00000005952	DNA damage-binding protein 2 isoform X3.	DNA repair protein complementing XP-G cells isoform X1.	0.749
DDB2	ERCC6	ENSTTRP00000013414	ENSTTRP00000013957	DNA damage-binding protein 2 isoform X3.	DNA excision repair protein ERCC-6 isoform X2.	0.624
DDB2	FANCM	ENSTTRP00000013414	ENSTTRP00000006317	DNA damage-binding protein 2 isoform X3.	Fanconi anemia group M protein isoform X1.	0.636
DDB2	XPA	ENSTTRP00000013414	ENSTTRP00000000477	DNA damage-binding protein 2 isoform X3.	DNA repair protein complementing XP-A cells.	0.974
EP300	BIVM	ENSTTRP00000003136	ENSTTRP00000005950	Histone acetyltransferase p300.	Basic immunoglobulin-like variable motif-containing protein isoform X3.	0.980