Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DAXX | PIAS2 | ENSTTRP00000004055 | ENSTTRP00000005681 | Death domain associated protein. | E3 SUMO-protein ligase PIAS2 isoform X2. | 0.580 |
DAXX | SENP1 | ENSTTRP00000004055 | ENSTTRP00000014647 | Death domain associated protein. | Sentrin-specific protease 1 isoform X2. | 0.525 |
DAXX | SUMO1 | ENSTTRP00000004055 | ENSTTRP00000000603 | Death domain associated protein. | Small ubiquitin-related modifier. | 0.982 |
DAXX | TP53 | ENSTTRP00000004055 | ENSTTRP00000009721 | Death domain associated protein. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.991 |
DAXX | UBE2I | ENSTTRP00000004055 | ENSTTRP00000011334 | Death domain associated protein. | Ubiquitin conjugating enzyme E2 I. | 0.828 |
PIAS2 | DAXX | ENSTTRP00000005681 | ENSTTRP00000004055 | E3 SUMO-protein ligase PIAS2 isoform X2. | Death domain associated protein. | 0.580 |
PIAS2 | PIAS4 | ENSTTRP00000005681 | ENSTTRP00000006411 | E3 SUMO-protein ligase PIAS2 isoform X2. | Protein inhibitor of activated STAT 4. | 0.768 |
PIAS2 | SAE1 | ENSTTRP00000005681 | ENSTTRP00000002084 | E3 SUMO-protein ligase PIAS2 isoform X2. | SUMO-activating enzyme subunit 1 isoform X1. | 0.553 |
PIAS2 | SENP1 | ENSTTRP00000005681 | ENSTTRP00000014647 | E3 SUMO-protein ligase PIAS2 isoform X2. | Sentrin-specific protease 1 isoform X2. | 0.606 |
PIAS2 | SUMO1 | ENSTTRP00000005681 | ENSTTRP00000000603 | E3 SUMO-protein ligase PIAS2 isoform X2. | Small ubiquitin-related modifier. | 0.981 |
PIAS2 | TP53 | ENSTTRP00000005681 | ENSTTRP00000009721 | E3 SUMO-protein ligase PIAS2 isoform X2. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.784 |
PIAS2 | UBE2I | ENSTTRP00000005681 | ENSTTRP00000011334 | E3 SUMO-protein ligase PIAS2 isoform X2. | Ubiquitin conjugating enzyme E2 I. | 0.932 |
PIAS4 | PIAS2 | ENSTTRP00000006411 | ENSTTRP00000005681 | Protein inhibitor of activated STAT 4. | E3 SUMO-protein ligase PIAS2 isoform X2. | 0.768 |
PIAS4 | RANBP2 | ENSTTRP00000006411 | ENSTTRP00000007002 | Protein inhibitor of activated STAT 4. | E3 SUMO-protein ligase RanBP2-like isoform X1. | 0.508 |
PIAS4 | SAE1 | ENSTTRP00000006411 | ENSTTRP00000002084 | Protein inhibitor of activated STAT 4. | SUMO-activating enzyme subunit 1 isoform X1. | 0.583 |
PIAS4 | SENP1 | ENSTTRP00000006411 | ENSTTRP00000014647 | Protein inhibitor of activated STAT 4. | Sentrin-specific protease 1 isoform X2. | 0.803 |
PIAS4 | SUMO1 | ENSTTRP00000006411 | ENSTTRP00000000603 | Protein inhibitor of activated STAT 4. | Small ubiquitin-related modifier. | 0.988 |
PIAS4 | TP53 | ENSTTRP00000006411 | ENSTTRP00000009721 | Protein inhibitor of activated STAT 4. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.930 |
PIAS4 | UBA2 | ENSTTRP00000006411 | ENSTTRP00000012256 | Protein inhibitor of activated STAT 4. | SUMO-activating enzyme subunit 2; The heterodimer acts as an E1 ligase for SUMO1, SUMO2, SUMO3, and probably SUMO4. It mediates ATP-dependent activation of SUMO proteins followed by formation of a thioester bond between a SUMO protein and a conserved active site cysteine residue on UBA2/SAE2. Belongs to the ubiquitin-activating E1 family. | 0.542 |
PIAS4 | UBE2I | ENSTTRP00000006411 | ENSTTRP00000011334 | Protein inhibitor of activated STAT 4. | Ubiquitin conjugating enzyme E2 I. | 0.929 |
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