STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RRP1BRibosomal RNA processing protein 1 homolog B isoform X3. (723 aa)    
Predicted Functional Partners:
BRIX1
Ribosome biogenesis protein BRX1 homolog.
   
 
 0.983
EBNA1BP2
Probable rRNA-processing protein EBP2.
   
 
 0.982
RSL1D1
Ribosomal L1 domain-containing protein 1.
   
 
 0.981
WDR74
WD repeat-containing protein 74.
   
 
 0.971
NIFK
MKI67 FHA domain-interacting nucleolar phosphoprotein.
   
 
 0.971
RPF1
Ribosome production factor 1.
   
 
 0.970
BOP1
Ribosome biogenesis protein BOP1 isoform X1.
   
 
 0.968
MAK16
Protein MAK16 homolog; Belongs to the MAK16 family.
   
 
 0.965
RSL24D1
Probable ribosome biogenesis protein RLP24.
   
 
 0.962
GTPBP4
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.961
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.