Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMFR | B4GALT6 | ENSTTRP00000012852 | ENSTTRP00000001779 | E3 ubiquitin-protein ligase AMFR isoform X1. | Beta-1,4-galactosyltransferase 6 isoform X1. | 0.687 |
AMFR | DERL2 | ENSTTRP00000012852 | ENSTTRP00000005274 | E3 ubiquitin-protein ligase AMFR isoform X1. | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | 0.969 |
AMFR | ENSTTRP00000013189 | ENSTTRP00000012852 | ENSTTRP00000013189 | E3 ubiquitin-protein ligase AMFR isoform X1. | annotation not available | 0.771 |
AMFR | GOSR1 | ENSTTRP00000012852 | ENSTTRP00000015495 | E3 ubiquitin-protein ligase AMFR isoform X1. | Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. | 0.698 |
AMFR | PIGO | ENSTTRP00000012852 | ENSTTRP00000005908 | E3 ubiquitin-protein ligase AMFR isoform X1. | GPI ethanolamine phosphate transferase 3 isoform X1. | 0.728 |
AMFR | ST3GAL5 | ENSTTRP00000012852 | ENSTTRP00000008147 | E3 ubiquitin-protein ligase AMFR isoform X1. | Lactosylceramide alpha-2,3-sialyltransferase isoform X2; Belongs to the glycosyltransferase 29 family. | 0.686 |
AMFR | SYVN1 | ENSTTRP00000012852 | ENSTTRP00000016351 | E3 ubiquitin-protein ligase AMFR isoform X1. | Synoviolin 1. | 0.583 |
AMFR | TMEM165 | ENSTTRP00000012852 | ENSTTRP00000000903 | E3 ubiquitin-protein ligase AMFR isoform X1. | GDT1 family protein. | 0.717 |
AMFR | UBE2J1 | ENSTTRP00000012852 | ENSTTRP00000003460 | E3 ubiquitin-protein ligase AMFR isoform X1. | Ubiquitin-conjugating enzyme E2 J1. | 0.790 |
B4GALT6 | AMFR | ENSTTRP00000001779 | ENSTTRP00000012852 | Beta-1,4-galactosyltransferase 6 isoform X1. | E3 ubiquitin-protein ligase AMFR isoform X1. | 0.687 |
B4GALT6 | DERL2 | ENSTTRP00000001779 | ENSTTRP00000005274 | Beta-1,4-galactosyltransferase 6 isoform X1. | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | 0.687 |
B4GALT6 | ENSTTRP00000013189 | ENSTTRP00000001779 | ENSTTRP00000013189 | Beta-1,4-galactosyltransferase 6 isoform X1. | annotation not available | 0.766 |
B4GALT6 | GOSR1 | ENSTTRP00000001779 | ENSTTRP00000015495 | Beta-1,4-galactosyltransferase 6 isoform X1. | Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. | 0.728 |
B4GALT6 | PIGO | ENSTTRP00000001779 | ENSTTRP00000005908 | Beta-1,4-galactosyltransferase 6 isoform X1. | GPI ethanolamine phosphate transferase 3 isoform X1. | 0.726 |
B4GALT6 | ST3GAL5 | ENSTTRP00000001779 | ENSTTRP00000008147 | Beta-1,4-galactosyltransferase 6 isoform X1. | Lactosylceramide alpha-2,3-sialyltransferase isoform X2; Belongs to the glycosyltransferase 29 family. | 0.944 |
B4GALT6 | SYVN1 | ENSTTRP00000001779 | ENSTTRP00000016351 | Beta-1,4-galactosyltransferase 6 isoform X1. | Synoviolin 1. | 0.691 |
B4GALT6 | TMEM165 | ENSTTRP00000001779 | ENSTTRP00000000903 | Beta-1,4-galactosyltransferase 6 isoform X1. | GDT1 family protein. | 0.719 |
B4GALT6 | UBE2J1 | ENSTTRP00000001779 | ENSTTRP00000003460 | Beta-1,4-galactosyltransferase 6 isoform X1. | Ubiquitin-conjugating enzyme E2 J1. | 0.680 |
CCDC22 | TMEM165 | ENSTTRP00000016089 | ENSTTRP00000000903 | Coiled-coil domain containing 22. | GDT1 family protein. | 0.693 |
DERL2 | AMFR | ENSTTRP00000005274 | ENSTTRP00000012852 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | E3 ubiquitin-protein ligase AMFR isoform X1. | 0.969 |
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