STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRP8Low-density lipoprotein receptor-related protein 8. (945 aa)    
Predicted Functional Partners:
RELN
LOW QUALITY PROTEIN: reelin.
    
 0.970
APOB
Apolipoprotein B-100.
    
 0.947
DAB1
Disabled homolog 1 isoform X2.
    
 0.940
LRPAP1
Alpha-2-macroglobulin receptor-associated protein.
    
 0.836
PCSK9
Proprotein convertase subtilisin/kexin type 9.
    
 0.830
LDLRAP1
Low density lipoprotein receptor adaptor protein 1.
    
 0.778
APOE
Apolipoprotein E; APOE is an apolipoprotein, a protein associating with lipid particles, that mainly functions in lipoprotein-mediated lipid transport between organs via the plasma and interstitial fluids. APOE is a core component of plasma lipoproteins and is involved in their production, conversion and clearance. Apoliproteins are amphipathic molecules that interact both with lipids of the lipoprotein particle core and the aqueous environment of the plasma. As such, APOE associates with chylomicrons, chylomicron remnants, very low density lipoproteins (VLDL) and intermediate density [...]
    
 0.696
MYLIP
E3 ubiquitin-protein ligase MYLIP.
    
 0.678
AGRN
Agrin.
    
 0.672
AXIN1
Axin-1 isoform X2.
    
 0.640
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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