STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYCBP2E3 ubiquitin-protein ligase MYCBP2 isoform X11. (4632 aa)    
Predicted Functional Partners:
FBXO45
F-box/SPRY domain-containing protein 1.
    
 
 0.956
RPS27A
ubiquitin-40S ribosomal protein S27a.
    
   0.799
UBA52
ubiquitin-60S ribosomal protein L40.
    
   0.799
HERC1
Probable E3 ubiquitin-protein ligase HERC1.
   
 
0.759
FBXL3
F-box/LRR-repeat protein 3 isoform X1.
 
    
 0.754
RIMS3
Regulating synaptic membrane exocytosis protein 3.
      
 0.701
RAE1
mRNA export factor isoform X3.
    
 
 0.697
SPSB4
SPRY domain-containing SOCS box protein 4.
    
 
 0.688
SPSB2
SPRY domain-containing SOCS box protein 2 isoform X2.
    
 
 0.688
SPSB1
splA/ryanodine receptor domain and SOCS box containing 1.
    
 
 0.688
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.