STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCBP4poly(rC) binding protein 4. (416 aa)    
Predicted Functional Partners:
NCBP2
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]
    
 0.675
SRSF3
Serine/arginine-rich splicing factor 3.
   
 0.666
SRSF1
Serine/arginine-rich splicing factor 1.
   
 0.661
NCBP1
Nuclear cap-binding protein subunit 1 isoform X1.
    
 0.653
HNRNPC
Heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1.
   
 0.653
TRA2B
Transformer-2 protein homolog beta isoform X2.
   
 0.652
TRA2A
Transformer-2 protein homolog alpha isoform X2.
   
 0.647
HNRNPM
Heterogeneous nuclear ribonucleoprotein M isoform X1.
   
 0.623
PRPF8
pre-mRNA-processing-splicing factor 8.
    
   0.617
ENSTTRP00000004627
annotation not available
   
0.608
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.