STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMSS1Protein CMSS1 isoform X1. (275 aa)    
Predicted Functional Partners:
NOP53
NOP53 ribosome biogenesis factor.
   
    0.863
LTV1
Protein LTV1 homolog.
   
    0.852
BYSL
Bystin like.
   
  
 0.800
RPF2
Ribosome production factor 2 homolog.
   
   0.754
NIFK
MKI67 FHA domain-interacting nucleolar phosphoprotein.
   
    0.751
UTP23
rRNA-processing protein UTP23 homolog.
   
    0.751
ESF1
ESF1 homolog.
   
    0.743
RBM28
RNA-binding protein 28.
   
    0.735
UTP3
Something about silencing protein 10.
   
    0.722
RSL24D1
Probable ribosome biogenesis protein RLP24.
   
    0.709
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.