STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF114E3 ubiquitin-protein ligase RNF114. (228 aa)    
Predicted Functional Partners:
CYLC1
LOW QUALITY PROTEIN: cylicin-1.
      
 0.777
UBE2L6
ubiquitin/ISG15-conjugating enzyme E2 L6; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.687
UBQLN4
Ubiquilin-4 isoform X1.
    
 0.628
PARP11
Poly [ADP-ribose] polymerase.
    
   0.617
XRN2
5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.
    
 
 0.592
PARP14
Poly [ADP-ribose] polymerase.
    
 
 0.568
MKRN1
E3 ubiquitin-protein ligase makorin-1-like.
      
 0.555
QKI
Protein quaking isoform X1.
    
 
 0.544
DMRT1
Doublesex- and mab-3-related transcription factor 1.
      
 0.543
PSMD11
26S proteasome non-ATPase regulatory subunit 11.
    
 
 0.500
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.