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SMTNL1 protein (Tursiops truncatus) - STRING interaction network
"SMTNL1" - Smoothelin-like 1 in Tursiops truncatus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMTNL1Smoothelin-like 1 (445 aa)    
Predicted Functional Partners:
MYO16
Myosin XVI (1749 aa)
     
  0.762
PPP1R12A
Protein phosphatase 1, regulatory subunit 12A (1029 aa)
     
  0.704
ANKK1
Ankyrin repeat and kinase domain containing 1 (762 aa)
     
  0.659
LRRK1
Leucine-rich repeat kinase 1 (2028 aa)
     
  0.630
LRRK2
Leucine-rich repeat kinase 2 (2526 aa)
     
  0.630
PPP1R12B
Protein phosphatase 1, regulatory subunit 12B (976 aa)
     
  0.562
KIDINS220
Kinase D-interacting substrate, 220kDa (1760 aa)
     
  0.561
TPM3
Tropomyosin 3 (285 aa)
     
  0.517
TPM4
Tropomyosin 4 (284 aa)
     
  0.517
TPM2
Tropomyosin 2 (beta) (320 aa)
     
  0.517
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottle-nosed dolphin, Cetacea, Delphinidae, Odontoceti, T. truncatus, Tursiops, Tursiops truncatus, bottle-nosed dolphin, bottlenosed dolphin, dolphins, marine dolphins, tooth whales, whale, whales, whales & dolphins, whales, dolphins, and porpoises
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