STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MATR3Matrin-3 isoform X1. (893 aa)    
Predicted Functional Partners:
FUS
RNA-binding protein FUS.
   
 
 0.809
HNRNPA2B1
Heterogeneous nuclear ribonucleoproteins A2/B1 isoform X5.
   
 
 0.808
HNRNPR
Heterogeneous nuclear ribonucleoprotein R isoform X1.
   
 
 0.791
HNRNPM
Heterogeneous nuclear ribonucleoprotein M isoform X1.
   
 
 0.777
SFPQ
Splicing factor, proline- and glutamine-rich.
   
 
 0.743
NONO
non-POU domain-containing octamer-binding protein isoform X1.
   
 
 0.736
C9orf72
Protein C9orf72 homolog.
      
 0.715
TIA1
Nucleolysin TIA-1 isoform X1.
   
 
 0.709
HNRNPC
Heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1.
   
 
 0.693
ENSTTRP00000004627
annotation not available
   
 
 0.682
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.