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HERC5 protein (Tursiops truncatus) - STRING interaction network
"HERC5" - HECT and RLD domain containing E3 ubiquitin protein ligase 5 in Tursiops truncatus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HERC5HECT and RLD domain containing E3 ubiquitin protein ligase 5 (1018 aa)    
Predicted Functional Partners:
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1 (128 aa)
     
  0.997
EHMT2
Euchromatic histone-lysine N-methyltransferase 2 (1017 aa)
     
  0.947
EHMT1
Euchromatic histone-lysine N-methyltransferase 1 (1262 aa)
     
  0.947
TRIP12
Thyroid hormone receptor interactor 12 (2038 aa)
     
0.930
ANKK1
Ankyrin repeat and kinase domain containing 1 (762 aa)
     
  0.922
FBXL19
F-box and leucine-rich repeat protein 19 (662 aa)
     
    0.907
KDM2B
Lysine (K)-specific demethylase 2B (1332 aa)
     
    0.907
KDM2A
Lysine (K)-specific demethylase 2A (1161 aa)
     
    0.907
UNK
Unkempt homolog (Drosophila) (810 aa)
       
    0.905
LRRK1
Leucine-rich repeat kinase 1 (2028 aa)
     
  0.896
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottle-nosed dolphin, Cetacea, Delphinidae, Odontoceti, T. truncatus, Tursiops, Tursiops truncatus, bottle-nosed dolphin, bottlenosed dolphin, dolphins, marine dolphins, tooth whales, whale, whales, whales & dolphins, whales, dolphins, and porpoises
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