STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPG7LOW QUALITY PROTEIN: paraplegin; Belongs to the AAA ATPase family. (792 aa)    
Predicted Functional Partners:
MAIP1
m-AAA protease-interacting protein 1, mitochondrial isoform X1.
    
 0.959
PHB
Prohibitin.
   
 0.877
PHB2
Prohibitin 2.
   
 0.875
CLPX
ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial.
 
  
 0.795
SPG21
Maspardin isoform X3.
      
 0.790
LONP2
Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import. May indirectly regulate peroxisomal fatty acid beta- oxidation through degradation of the self-processed forms of TYSND1.
  
 
 0.732
MRPL19
39S ribosomal protein L19, mitochondrial.
  
 
 0.729
PMPCA
Mitochondrial-processing peptidase subunit alpha isoform X1; Belongs to the peptidase M16 family.
  
 0.722
TRIM41
E3 ubiquitin-protein ligase TRIM41 isoform X1.
   
    0.719
MRPL3
39S ribosomal protein L3, mitochondrial isoform X1; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.715
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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