STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXC10Homeobox C10. (342 aa)    
Predicted Functional Partners:
HOXC9
Homeobox protein Hox-C9.
   
 
 0.912
HOXD9
Homeobox protein Hox-D9.
   
  
0.752
TBX4
T-box transcription factor TBX4.
    
 
 0.704
TIGD4
Tigger transposable element-derived protein 4.
      
 0.686
HOXC6
Homeobox protein Hox-C6 isoform 1.
   
 
0.530
EBNA1BP2
Probable rRNA-processing protein EBP2.
      
 0.527
ZSWIM2
E3 ubiquitin-protein ligase ZSWIM2.
      
 0.527
ENSTTRP00000007715
annotation not available
      
 0.520
HOXC4
Homeobox protein Hox-C4.
   
 
0.496
PDHX
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
      
 0.493
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.