STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXC13Homeobox protein Hox-C13. (335 aa)    
Predicted Functional Partners:
FOXN1
Forkhead box protein N1 isoform X1.
   
 
 0.812
KRT35
Keratin 35.
   
  
 0.744
MSX2
Homeobox protein MSX-2.
   
  
0.721
KRT32
LOW QUALITY PROTEIN: keratin, type I cuticular Ha2; Belongs to the intermediate filament family.
      
 0.706
LEF1
Lymphoid enhancer binding factor 1.
    
 
 0.699
LOC109552089
LOW QUALITY PROTEIN: keratin, type II cuticular Hb2-like; Belongs to the intermediate filament family.
      
 0.694
OVOL1
Ovo like transcriptional repressor 1.
    
 
 0.693
VSIG8
V-set and immunoglobulin domain-containing protein 8.
      
 0.680
LHX2
LIM/homeobox protein Lhx2.
    
 
 0.672
BMPR1A
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
   
  
 0.569
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.