STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTN4Reticulon. (1189 aa)    
Predicted Functional Partners:
BACE1
Beta-secretase 1; Belongs to the peptidase A1 family.
   
 0.960
RTN3
Reticulon.
    
0.955
BACE2
Beta-secretase 2; Belongs to the peptidase A1 family.
   
 0.931
OMG
Oligodendrocyte-myelin glycoprotein.
    
 0.778
LINGO1
Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1.
    
 0.774
NGFR
Tumor necrosis factor receptor superfamily member 16.
     
 0.764
MAG
Myelin-associated glycoprotein.
     
 0.764
ATL3
Atlastin-3 isoform X1.
    
 
 0.758
RTN1
Reticulon.
  
 
 
0.736
ATL1
Atlastin-1 isoform X1.
    
 
 0.734
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.