STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS13DVacuolar protein sorting-associated protein 13D isoform X1. (4386 aa)    
Predicted Functional Partners:
KIAA2013
Uncharacterized protein KIAA2013 homolog.
      
 0.791
SHQ1
LOW QUALITY PROTEIN: protein SHQ1 homolog.
      
 0.786
ATG2B
Autophagy-related protein 2 homolog B isoform X5.
   
  
 0.732
MIGA2
Mitoguardin 2.
      
 0.683
ARHGAP27
Rho GTPase-activating protein 27.
      
 0.678
KMT2A
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.
  
  
 0.645
NBEAL1
Neurobeachin-like protein 1.
   
  
 0.636
KLHL1
Kelch-like protein 1 isoform X1.
      
 0.571
RSU1
Ras suppressor protein 1 isoform X1.
      
 0.566
EHBP1L1
EH domain binding protein 1 like 1.
      
 0.566
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.