STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDCD7Programmed cell death protein 7. (417 aa)    
Predicted Functional Partners:
SNRNP48
U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X1.
   
 0.964
SNRNP25
U11/U12 small nuclear ribonucleoprotein 25 kDa protein.
     
 0.961
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.878
SNRNP70
U1 small nuclear ribonucleoprotein 70 kDa isoform X1.
    
 0.857
SMARCB1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.
    
 0.848
PBRM1
Protein polybromo-1 isoform X2.
    
 0.836
SMARCE1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.
    
 0.833
PHF10
PHD finger protein 10 isoform X1.
    
 0.750
ACTL6A
Actin-like protein 6A; Belongs to the actin family.
    
 0.729
ACTL6B
Actin-like protein 6B; Belongs to the actin family.
    
 0.729
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.