Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCDC155 | SUN1 | ENSTTRP00000005094 | ENSTTRP00000010876 | Protein KASH5. | SUN domain-containing protein 1 isoform X6. | 0.962 |
CCDC155 | SUN2 | ENSTTRP00000005094 | ENSTTRP00000005313 | Protein KASH5. | SUN domain-containing protein 2. | 0.953 |
CCDC155 | SYNE1 | ENSTTRP00000005094 | ENSTTRP00000002826 | Protein KASH5. | Nesprin-1 isoform X1. | 0.554 |
CCDC155 | SYNE2 | ENSTTRP00000005094 | ENSTTRP00000000483 | Protein KASH5. | Nesprin-2 isoform X2. | 0.520 |
CCDC155 | SYNE4 | ENSTTRP00000005094 | ENSTTRP00000003684 | Protein KASH5. | Nesprin-4 isoform X1. | 0.576 |
EMD | LBR | ENSTTRP00000013203 | ENSTTRP00000011060 | Emerin isoform X2. | lamin-B receptor. | 0.949 |
EMD | LMNA | ENSTTRP00000013203 | ENSTTRP00000001313 | Emerin isoform X2. | Lamin A/C. | 0.996 |
EMD | LMNB1 | ENSTTRP00000013203 | ENSTTRP00000012818 | Emerin isoform X2. | lamin-B1 isoform X1; Belongs to the intermediate filament family. | 0.986 |
EMD | LMNB2 | ENSTTRP00000013203 | ENSTTRP00000006667 | Emerin isoform X2. | lamin-B2 isoform X2; Belongs to the intermediate filament family. | 0.962 |
EMD | SUN1 | ENSTTRP00000013203 | ENSTTRP00000010876 | Emerin isoform X2. | SUN domain-containing protein 1 isoform X6. | 0.806 |
EMD | SUN2 | ENSTTRP00000013203 | ENSTTRP00000005313 | Emerin isoform X2. | SUN domain-containing protein 2. | 0.799 |
EMD | SYNE1 | ENSTTRP00000013203 | ENSTTRP00000002826 | Emerin isoform X2. | Nesprin-1 isoform X1. | 0.842 |
EMD | SYNE2 | ENSTTRP00000013203 | ENSTTRP00000000483 | Emerin isoform X2. | Nesprin-2 isoform X2. | 0.806 |
EMD | SYNE4 | ENSTTRP00000013203 | ENSTTRP00000003684 | Emerin isoform X2. | Nesprin-4 isoform X1. | 0.485 |
LBR | EMD | ENSTTRP00000011060 | ENSTTRP00000013203 | lamin-B receptor. | Emerin isoform X2. | 0.949 |
LBR | LMNA | ENSTTRP00000011060 | ENSTTRP00000001313 | lamin-B receptor. | Lamin A/C. | 0.773 |
LBR | LMNB1 | ENSTTRP00000011060 | ENSTTRP00000012818 | lamin-B receptor. | lamin-B1 isoform X1; Belongs to the intermediate filament family. | 0.855 |
LBR | LMNB2 | ENSTTRP00000011060 | ENSTTRP00000006667 | lamin-B receptor. | lamin-B2 isoform X2; Belongs to the intermediate filament family. | 0.790 |
LBR | SUN1 | ENSTTRP00000011060 | ENSTTRP00000010876 | lamin-B receptor. | SUN domain-containing protein 1 isoform X6. | 0.722 |
LBR | SUN2 | ENSTTRP00000011060 | ENSTTRP00000005313 | lamin-B receptor. | SUN domain-containing protein 2. | 0.776 |
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