STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTRAFUPF0568 protein C14orf166 homolog. (244 aa)    
Predicted Functional Partners:
DDX1
ATP-dependent RNA helicase DDX1 isoform X1.
   
 0.973
RTCB
RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.
   
 0.970
FAM98B
Protein FAM98B.
    
 0.959
FAM98A
Protein FAM98A isoform X1.
    
 
 0.939
C2orf49
Ashwin.
    
 0.922
FAM98C
Family with sequence similarity 98 member C.
    
 
 0.784
LSM12
Protein LSM12 homolog.
    
 
 0.756
HNRNPDL
Heterogeneous nuclear ribonucleoprotein D-like.
   
  
 0.714
ELAVL4
ELAV like RNA binding protein 4.
   
  
 0.700
STAU2
Double-stranded RNA-binding protein Staufen homolog 2 isoform X4.
      
 0.694
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.