STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM53Transmembrane protein 53. (257 aa)    
Predicted Functional Partners:
ASPHD2
Aspartate beta-hydroxylase domain-containing protein 2 isoform X2.
      
 0.800
ACBD6
acyl-CoA-binding domain-containing protein 6 isoform X2.
      
 0.800
B3GLCT
Beta-1,3-glucosyltransferase isoform X1.
      
 0.798
TMEM223
Transmembrane protein 223.
      
 0.797
TMEM147
LOW QUALITY PROTEIN: transmembrane protein 147.
      
 0.758
RNF220
E3 ubiquitin-protein ligase RNF220 isoform X2.
      
 0.691
TMEM154
Transmembrane protein 154 isoform X1.
      
 0.690
TMEM238L
Transmembrane protein 238 like.
      
 0.688
TMEM38A
Trimeric intracellular cation channel type A.
      
 0.680
DNAJC3
dnaJ homolog subfamily C member 3 isoform X1.
      
 0.672
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.