STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNF8SNF8 subunit of ESCRT-II. (258 aa)    
Predicted Functional Partners:
VPS25
Vacuolar protein-sorting-associated protein 25.
   
 0.999
VPS36
Vacuolar protein-sorting-associated protein 36 isoform X1.
   
 0.994
ENSTTRP00000012006
annotation not available
   
 0.994
CHMP6
Charged multivesicular body protein 6.
    
 0.977
C17orf75
Protein Njmu-R1.
    
 0.947
CHMP2A
Charged multivesicular body protein 2a isoform X2.
   
 0.927
VPS28
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.911
CHMP4C
Charged multivesicular body protein 4c.
    
 0.885
CHMP4B
Charged multivesicular body protein 4b.
    
 0.885
TM9SF1
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
    
 0.871
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.