STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMARCA1Probable global transcription activator SNF2L1. (984 aa)    
Predicted Functional Partners:
BAZ1A
Bromodomain adjacent to zinc finger domain protein 1A isoform X2.
    
 0.942
CECR2
Cat eye syndrome critical region protein 2 isoform X2.
    
 0.923
BAZ1B
Tyrosine-protein kinase BAZ1B.
   
 0.916
ENSTTRP00000014196
annotation not available
   
 0.913
BPTF
Nucleosome-remodeling factor subunit BPTF isoform X12.
   
 
 0.897
POLE3
DNA polymerase epsilon subunit 3.
    
 0.892
BAZ2A
Bromodomain adjacent to zinc finger domain protein 2A isoform X2.
    
 0.879
RSF1
Remodeling and spacing factor 1 isoform X4.
   
 0.878
RBBP7
Histone-binding protein RBBP7 isoform X1.
   
 0.854
CHRAC1
Chromatin accessibility complex protein 1.
    
 
 0.829
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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