Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CNTNAP4 | FAM43A | ENSTTRP00000000266 | ENSTTRP00000000526 | Contactin-associated protein-like 4 isoform X1. | Family with sequence similarity 43 member A. | 0.671 |
CNTNAP4 | GAN | ENSTTRP00000000266 | ENSTTRP00000006422 | Contactin-associated protein-like 4 isoform X1. | Gigaxonin isoform X7. | 0.669 |
CNTNAP4 | XXYLT1 | ENSTTRP00000000266 | ENSTTRP00000014990 | Contactin-associated protein-like 4 isoform X1. | Xyloside xylosyltransferase 1. | 0.576 |
CUL1 | CUL3 | ENSTTRP00000016465 | ENSTTRP00000000268 | Cullin-1; Belongs to the cullin family. | Cullin-3 isoform X1; Belongs to the cullin family. | 0.814 |
CUL1 | GAN | ENSTTRP00000016465 | ENSTTRP00000006422 | Cullin-1; Belongs to the cullin family. | Gigaxonin isoform X7. | 0.656 |
CUL3 | CUL1 | ENSTTRP00000000268 | ENSTTRP00000016465 | Cullin-3 isoform X1; Belongs to the cullin family. | Cullin-1; Belongs to the cullin family. | 0.814 |
CUL3 | GAN | ENSTTRP00000000268 | ENSTTRP00000006422 | Cullin-3 isoform X1; Belongs to the cullin family. | Gigaxonin isoform X7. | 0.801 |
DES | GAN | ENSTTRP00000011067 | ENSTTRP00000006422 | Desmin; Belongs to the intermediate filament family. | Gigaxonin isoform X7. | 0.681 |
FAM43A | CNTNAP4 | ENSTTRP00000000526 | ENSTTRP00000000266 | Family with sequence similarity 43 member A. | Contactin-associated protein-like 4 isoform X1. | 0.671 |
FAM43A | GAN | ENSTTRP00000000526 | ENSTTRP00000006422 | Family with sequence similarity 43 member A. | Gigaxonin isoform X7. | 0.679 |
FAM43A | XXYLT1 | ENSTTRP00000000526 | ENSTTRP00000014990 | Family with sequence similarity 43 member A. | Xyloside xylosyltransferase 1. | 0.680 |
GAN | CNTNAP4 | ENSTTRP00000006422 | ENSTTRP00000000266 | Gigaxonin isoform X7. | Contactin-associated protein-like 4 isoform X1. | 0.669 |
GAN | CUL1 | ENSTTRP00000006422 | ENSTTRP00000016465 | Gigaxonin isoform X7. | Cullin-1; Belongs to the cullin family. | 0.656 |
GAN | CUL3 | ENSTTRP00000006422 | ENSTTRP00000000268 | Gigaxonin isoform X7. | Cullin-3 isoform X1; Belongs to the cullin family. | 0.801 |
GAN | DES | ENSTTRP00000006422 | ENSTTRP00000011067 | Gigaxonin isoform X7. | Desmin; Belongs to the intermediate filament family. | 0.681 |
GAN | FAM43A | ENSTTRP00000006422 | ENSTTRP00000000526 | Gigaxonin isoform X7. | Family with sequence similarity 43 member A. | 0.679 |
GAN | INA | ENSTTRP00000006422 | ENSTTRP00000003118 | Gigaxonin isoform X7. | Alpha-internexin; Belongs to the intermediate filament family. | 0.671 |
GAN | OTUD4 | ENSTTRP00000006422 | ENSTTRP00000011571 | Gigaxonin isoform X7. | OTU domain-containing protein 4 isoform X2. | 0.744 |
GAN | RNF216 | ENSTTRP00000006422 | ENSTTRP00000010213 | Gigaxonin isoform X7. | E3 ubiquitin-protein ligase RNF216 isoform X1. | 0.692 |
GAN | SACS | ENSTTRP00000006422 | ENSTTRP00000011033 | Gigaxonin isoform X7. | Sacsin. | 0.751 |
page 1 of 2