STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RANBP2E3 SUMO-protein ligase RanBP2-like isoform X1. (3067 aa)    
Predicted Functional Partners:
NUP160
Nuclear pore complex protein Nup160 isoform X1.
   
 0.999
SUMO1
Small ubiquitin-related modifier.
   
 0.999
NUP155
Nuclear pore complex protein Nup155 isoform X1.
   
 0.999
RANGAP1
Ran GTPase-activating protein 1.
   
 0.999
NUP214
Nuclear pore complex protein Nup214 isoform X7.
   
 0.999
NUP93
Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.
   
 0.999
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.999
NUP43
Nucleoporin Nup43.
   
 0.999
NUP133
Nuclear pore complex protein Nup133 isoform X1.
   
 0.999
SEH1L
Nucleoporin SEH1 isoform X2; Belongs to the WD repeat SEC13 family.
    
 0.999
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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